PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000274026	[[122737598, 122738841], [122739198, 122739332], [122739954, 122740068], [122740526, 122740734], [122741696, 122741920], [122742133, 122742246], [122743557, 122743801], [122744570, 122745087]]	[[122738792, 122738841], [122739198, 122739332], [122739954, 122740068], [122740526, 122740734], [122741696, 122741920], [122742133, 122742246], [122743557, 122743801], [122744570, 122744783]]
NM_001237	[[122737598, 122738841], [122739198, 122739332], [122739954, 122740068], [122740526, 122740734], [122741696, 122741920], [122742133, 122742246], [122743557, 122743801], [122744570, 122745156]]	[[122738792, 122738841], [122739198, 122739332], [122739954, 122740068], [122740526, 122740734], [122741696, 122741920], [122742133, 122742246], [122743557, 122743801], [122744570, 122744783]]

Promoter

Chrom	Start	End	Description
chr4	122744998	122745093	CAGE_peak_1_at_CCNA2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I121821	121821650	121824689	2.05	[{'connected_gene': 'CCNA2', 'score': 550.77}, {'connected_gene': 'EXOSC9', 'score': 40.56}, {'connected_gene': 'BBS7', 'score': 13.42}, {'connected_gene': 'ENSG00000237868', 'score': 9.69}]
chr4	GH04I122763	122762801	122766809	1.63	[{'connected_gene': 'CETN4P', 'score': 20.75}, {'connected_gene': 'FGF2', 'score': 15.11}, {'connected_gene': 'BBS12', 'score': 11.21}, {'connected_gene': 'SPATA5', 'score': 10.91}, {'connected_gene': 'NUDT6', 'score': 10.91}, {'connected_gene': 'CCNA2', 'score': 4.59}, {'connected_gene': 'LOC727709', 'score': 0.31}, {'connected_gene': 'RPL34P12', 'score': 0.23}]
chr4	GH04I121869	121869366	121871200	1.95	[{'connected_gene': 'BBS7', 'score': 563.07}, {'connected_gene': 'ENSG00000261501', 'score': 550.77}, {'connected_gene': 'CCNA2', 'score': 0.25}]
chr4	GH04I121788	121788921	121792217	1.15	[{'connected_gene': 'TMEM155', 'score': 24.1}, {'connected_gene': 'PP12613', 'score': 11.96}, {'connected_gene': 'CCNA2', 'score': 11.51}, {'connected_gene': 'BBS7', 'score': 11.38}, {'connected_gene': 'EXOSC9', 'score': 6.22}]
chr4	GH04I121794	121794559	121797022	1.15	[{'connected_gene': 'TMEM155', 'score': 11.68}, {'connected_gene': 'PP12613', 'score': 11.67}, {'connected_gene': 'CCNA2', 'score': 11.53}, {'connected_gene': 'BBS7', 'score': 11.43}, {'connected_gene': 'EXOSC9', 'score': 6.45}]