PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000431809	[[560403, 560514], [561761, 561892], [562078, 562776], [563188, 563993]]	[[561768, 561892], [562078, 562776], [563188, 563380]]
ENST00000397582	[[560955, 561033], [561761, 561892], [562078, 562776], [563188, 564012]]	[[561768, 561892], [562078, 562776], [563188, 563380]]
ENST00000414138	[[560970, 561033], [561761, 561892], [562083, 562776], [563188, 563980]]	[[561768, 561892], [562083, 562322]]
ENST00000524468	[[560986, 561033], [562078, 562456]]	None
ENST00000344375	[[560998, 561033], [561761, 561892], [562078, 562776], [563188, 563317], [563395, 563478], [563557, 563645]]	[[561768, 561892], [562078, 562776], [563188, 563317], [563395, 563478], [563557, 563645]]
ENST00000397583	[[561051, 561477], [561761, 561892], [562078, 562776], [563188, 563317], [563395, 563478], [563557, 564018]]	[[561768, 561892], [562078, 562776], [563188, 563317], [563395, 563478], [563557, 563645]]
ENST00000454668	[[561449, 561477], [561761, 561892], [562078, 562776], [563188, 563317], [563557, 564021]]	[[561768, 561892], [562078, 562776], [563188, 563317], [563557, 563569]]
ENST00000528736	[[561546, 561892], [562078, 562205]]	[[561768, 561892], [562078, 562205]]
ENST00000531112	[[562384, 562776], [563188, 563478], [563557, 563685]]	[[562384, 562776], [563188, 563380]]
NM_001143993	[[560970, 561033], [561761, 561892], [562078, 562776], [563188, 564025]]	[[561768, 561892], [562078, 562776], [563188, 563380]]
NM_001143994	[[561449, 561477], [561761, 561892], [562078, 562776], [563188, 563317], [563557, 564025]]	[[561768, 561892], [562078, 562776], [563188, 563317], [563557, 563569]]
NM_003475	[[561449, 561477], [561761, 561892], [562078, 562776], [563188, 563317], [563395, 563478], [563557, 564025]]	[[561768, 561892], [562078, 562776], [563188, 563317], [563395, 563478], [563557, 563645]]

Promoter

Chrom	Start	End	Description
chr11	560958	561046	CAGE_peak_1_at_RASSF7_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I000559	559142	566688	2.21	[{'connected_gene': 'LMNTD2', 'score': 557.47}, {'connected_gene': 'RASSF7', 'score': 550.77}, {'connected_gene': 'GC11M000563', 'score': 550.77}, {'connected_gene': 'PHRF1', 'score': 15.36}, {'connected_gene': 'HRAS', 'score': 12.51}, {'connected_gene': 'TMEM80', 'score': 11.56}, {'connected_gene': 'PKP3', 'score': 5.27}, {'connected_gene': 'RNH1', 'score': 4.92}, {'connected_gene': 'PTDSS2', 'score': 4.43}, {'connected_gene': 'GC11M000576', 'score': 0.44}, {'connected_gene': 'GC11M000578', 'score': 0.44}, {'connected_gene': 'LOC692247', 'score': 0.44}, {'connected_gene': 'MIR210HG', 'score': 0.44}]
chr11	GH11I000514	514302	516144	0.58	[{'connected_gene': 'LOC105376507', 'score': 550.77}, {'connected_gene': 'RNH1', 'score': 18.43}, {'connected_gene': 'HRAS', 'score': 12.9}, {'connected_gene': 'LOC692247', 'score': 12.82}, {'connected_gene': 'RASSF7', 'score': 12.82}, {'connected_gene': 'LMNTD2', 'score': 12.81}, {'connected_gene': 'PTDSS2', 'score': 12.12}, {'connected_gene': 'SLC25A22', 'score': 11.01}, {'connected_gene': 'CEND1', 'score': 11.01}, {'connected_gene': 'PIDD1', 'score': 11.01}, {'connected_gene': 'RPLP2', 'score': 11.01}, {'connected_gene': 'ENSG00000255158', 'score': 10.57}, {'connected_gene': 'DRD4', 'score': 8.86}, {'connected_gene': 'LRRC56', 'score': 0.77}, {'connected_gene': 'GC11P000507', 'score': 0.44}]