PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000322563	[[75897368, 75898283], [75902607, 75902900], [75905610, 75905888], [75907526, 75907762], [75917368, 75917576]]	[[75898108, 75898283], [75902607, 75902900], [75905610, 75905888], [75907526, 75907762], [75917368, 75917451]]
ENST00000529461	[[75917435, 75917542], [75917918, 75917999], [75921515, 75921780]]	[[75917435, 75917451]]
ENST00000532150	[[75917465, 75917542], [75921390, 75921774]]	None
NM_004626	[[75897369, 75898283], [75902607, 75902900], [75905610, 75905888], [75907526, 75907762], [75917368, 75917574]]	[[75898108, 75898283], [75902607, 75902900], [75905610, 75905888], [75907526, 75907762], [75917368, 75917451]]

Promoter

Chrom	Start	End	Description
chr11	75917529	75917555	CAGE_peak_2_at_WNT11_5end
chr11	75917569	75917576	CAGE_peak_3_at_WNT11_5end
chr11	75921800	75921806	CAGE_peak_1_at_WNT11_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I076146	76146642	76149839	0.94	[{'connected_gene': 'WNT11', 'score': 11.47}, {'connected_gene': 'DGAT2', 'score': 10.81}, {'connected_gene': 'ENSG00000254814', 'score': 10.81}, {'connected_gene': 'MOGAT2', 'score': 10.43}, {'connected_gene': 'UVRAG', 'score': 5.49}, {'connected_gene': 'LOC100506113', 'score': 4.8}, {'connected_gene': 'ENSG00000255421', 'score': 0.39}, {'connected_gene': 'GC11P076191', 'score': 0.26}]
chr11	GH11I076330	76330057	76330206	0.2	[{'connected_gene': 'WNT11', 'score': 11.81}, {'connected_gene': 'LOC105369395', 'score': 0.25}, {'connected_gene': 'THAP12', 'score': 0.23}]
chr11	GH11I076329	76329197	76329346	0.8	[{'connected_gene': 'WNT11', 'score': 11.81}, {'connected_gene': 'LOC105369395', 'score': 0.26}, {'connected_gene': 'THAP12', 'score': 0.23}]
chr11	GH11I076250	76250801	76252056	0.76	[{'connected_gene': 'WNT11', 'score': 5.45}, {'connected_gene': 'PIR48934', 'score': 0.44}, {'connected_gene': 'LOC105369395', 'score': 0.29}]
chr11	GH11I076264	76264911	76268032	1.12	[{'connected_gene': 'WNT11', 'score': 5.08}, {'connected_gene': 'LOC105369395', 'score': 0.37}, {'connected_gene': 'PIR48934', 'score': 0.34}]
chr11	GH11I076205	76205602	76210846	2.31	[{'connected_gene': 'WNT11', 'score': 552.69}, {'connected_gene': 'GC11P076210', 'score': 550.77}, {'connected_gene': 'ENSG00000255362', 'score': 7.2}, {'connected_gene': 'ENSG00000261578', 'score': 5.9}, {'connected_gene': 'LOC101928837', 'score': 4.75}, {'connected_gene': 'ENSG00000254933', 'score': 0.37}]
chr11	GH11I076558	76558983	76561101	0.72	[{'connected_gene': 'LRRC32', 'score': 11.26}, {'connected_gene': 'ENSG00000254975', 'score': 11.25}, {'connected_gene': 'WNT11', 'score': 4.57}, {'connected_gene': 'PIR57504', 'score': 0.34}, {'connected_gene': 'EMSY', 'score': 0.13}]
chr11	GH11I076368	76368997	76370196	0.4	[{'connected_gene': 'GVQW3', 'score': 7.26}, {'connected_gene': 'ENSG00000255135', 'score': 5.99}, {'connected_gene': 'WNT11', 'score': 4.79}, {'connected_gene': 'THAP12', 'score': 0.39}, {'connected_gene': 'LOC105369395', 'score': 0.17}]
chr11	GH11I076233	76233278	76237530	1.73	[{'connected_gene': 'TRP-TGG2-1', 'score': 550.77}, {'connected_gene': 'TRP-AGG2-4', 'score': 550.77}, {'connected_gene': 'PIR59119', 'score': 550.77}, {'connected_gene': 'GC11M076236', 'score': 550.77}, {'connected_gene': 'EMSY', 'score': 34.32}, {'connected_gene': 'RPS3', 'score': 23.48}, {'connected_gene': 'WNT11', 'score': 13.18}, {'connected_gene': 'GVQW3', 'score': 11.62}, {'connected_gene': 'SNORD15B', 'score': 11.59}, {'connected_gene': 'ENSG00000272301', 'score': 11.12}, {'connected_gene': 'ENSG00000255362', 'score': 6.8}]
chr11	GH11I076152	76152001	76154286	1.37	[{'connected_gene': 'ENSG00000254814', 'score': 11.53}, {'connected_gene': 'DGAT2', 'score': 11.53}, {'connected_gene': 'WNT11', 'score': 11.47}, {'connected_gene': 'EMSY', 'score': 10.87}, {'connected_gene': 'MOGAT2', 'score': 10.43}, {'connected_gene': 'SNORD15B', 'score': 9.87}, {'connected_gene': 'ENSG00000254429', 'score': 4.21}, {'connected_gene': 'ENSG00000255421', 'score': 0.37}, {'connected_gene': 'GC11P076191', 'score': 0.28}]
chr11	GH11I076243	76243317	76243446	0.46	[{'connected_gene': 'PIR48934', 'score': 550.77}, {'connected_gene': 'WNT11', 'score': 11.79}, {'connected_gene': 'LOC105369395', 'score': 0.26}]
chr11	GH11I076184	76184057	76187838	0.89	[{'connected_gene': 'GC11P076191', 'score': 0.77}, {'connected_gene': 'WNT11', 'score': 0.31}, {'connected_gene': 'ENSG00000255421', 'score': 0.25}]