PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
MORF4L1	1	MORF4L2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Sy SM (2009), Huttlin EL (2015), Huttlin EL (2017)	3
SIN3A	13	SAP30	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Yochum GS (2001), Kuzmichev A (2002), Kuzmichev A (2002), Kuzmichev A (2002), Laherty CD (1998), Viiri KM (2006), Viiri KM (2006), Nakamura T (2002), Lai A (2001), Skowyra D (2001), Zhang Y (1998), Zhang Y (1998), Xie T (2011), Xie T (2011), Bantscheff M (2011), Hein MY (2015)	21
MORF4L1	1	SIN3A	13	affinity chromatography technology	Doyon Y (2004)	1
GATAD1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Varier RA (2016)	3
MORF4L2	0	KDM5A	6	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2007)	2
SIN3B	5	SIN3A	13	affinity chromatography technology	Hein MY (2015)	1
HIST3H3	0	GATAD1	0	unspecified method	Vermeulen M (2010)	1
HDAC1	4	GATAD1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Vermeulen M (2010), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
MORF4L2	0	PHF12	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
PHF12	6	ZNF281	1	affinity chromatography technology	Varier RA (2016)	1
HSPB1	2	ZNF131	0	two hybrid	Katsogiannou M (2014)	1
BRCA1	7	H2AFY	1	imaging technique	Ganesan S (2002)	1
PHF12	6	ABCF2	3	affinity chromatography technology	Varier RA (2016)	1
PHF12	6	GPATCH8	5	affinity chromatography technology	Varier RA (2016)	1
BRCA1	7	TUBA4A	1	affinity chromatography technology	Ertych N (2016)	1
EMSY	3	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Varier RA (2016), Varier RA (2016), Varier RA (2016)	3
HDAC2	1	EMSY	3	affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Varier RA (2016)	2
HDAC1	4	SIN3B	5	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1999), Koipally J (1999), Romm E (2005), Humphrey GW (2001), Terhune SS (2010), Joshi P (2013), Wan C (2015), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	10
PHF12	6	RBFOX2	5	affinity chromatography technology	Varier RA (2016)	1
PHF12	6	DNAJA3	2	affinity chromatography technology	Varier RA (2016)	1
BRCA1	7	HDAC2	1	pull down, affinity chromatography technology, genetic interference	Yarden RI (1999), Chang S (2011), Shen JP (2017)	3
EMSY	3	ZNF281	1	affinity chromatography technology	Varier RA (2016)	1
HDAC1	4	SENP1	0	affinity chromatography technology	Cheng J (2004)	1
GATAD1	0	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Hein MY (2015), Varier RA (2016)	4
GATAD1	0	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Varier RA (2016), Varier RA (2016), Varier RA (2016), Varier RA (2016)	6
RBBP7	1	PHF12	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	4
BRCA1	7	TUBB8	2	affinity chromatography technology	Ertych N (2016)	1
HDAC1	4	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Yao YL (2003), Fleischer TC (2003), Fleischer TC (2003), Yang L (2003), Grozinger CM (1999), Zhang J (2002), Zhang J (2002), You A (2001), Zhang Y (1999), Zhang Y (2002), Tong JK (1998), Hassig CA (1998), Yasui D (2002), Huang EY (2000), Huang EY (2000), Kuzmichev A (2002), Kuzmichev A (2002), Martinowich K (2003), Martinowich K (2003), Suzuki M (2003), Suzuki M (2006), Nakamura T (2002), Wei Q (2005), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Skowyra D (2001), Humphrey GW (2001), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Oh YM (2009), Wan C (2015), Hein MY (2015), Hsu DS (2014), Huttlin EL (2017)	45
PHF12	6	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016)	2
MORF4L2	0	SIN3B	5	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010)	2
GATAD1	0	NFE2L1	4	affinity chromatography technology	Varier RA (2016)	1
PHF12	6	PHF12	6	affinity chromatography technology	Varier RA (2016)	1
HDAC1	4	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, affinity chromatography technology	Hakimi MA (2002), Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Fischle W (2002), Johnson CA (2002), Fischle W (2001), Fischer DD (2002), Fischer DD (2002), Ashburner BP (2001), Zhang Y (1999), Tong JK (1998), Tong JK (1998), Hassig CA (1998), Hassig CA (1998), Zhang Y (1997), van der Vlag J (1999), van der Vlag J (1999), Noh EJ (2009), Noh EJ (2009), Galasinski SC (2002), Galasinski SC (2002), Galasinski SC (2002), He S (2005), Humphrey GW (2001), Park JH (2004), Park JH (2004), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Martinez FP (2012), Martinez FP (2012), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Joshi P (2013), Schnur N (2007), Schnur N (2007), Oh YM (2009), Wan C (2015), Hein MY (2015), Chen TC (2014), Huttlin EL (2017)	48
HIST3H3	0	H2AFY	1	affinity chromatography technology	Chen H (2014)	1
HDAC1	4	HIST3H3	0	enzymatic study, unspecified method	Shi Y (2003), Vermeulen M (2010)	2
MORF4L1	1	BRCA1	7	affinity chromatography technology	Hayakawa T (2010)	1
GATAD1	0	MORF4L2	0	affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Varier RA (2016)	2
PHF12	6	ABCG2	4	affinity chromatography technology	Varier RA (2016)	1
MORF4L1	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Wan C (2015), Huttlin EL (2017)	4
PHF12	6	TUBA4A	1	affinity chromatography technology	Varier RA (2016)	1
MORF4L1	1	ZNF131	0	affinity chromatography technology	Hayakawa T (2007)	1
EMSY	3	QSER1	7	affinity chromatography technology	Varier RA (2016)	1
PHF12	6	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Hein MY (2015), Varier RA (2016)	3
PHF12	6	NFE2L1	4	affinity chromatography technology	Varier RA (2016)	1
SAP30	1	RBBP7	1	affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Kuzmichev A (2002), Lai A (2001), Zhang Y (1998), Zhang Y (1998), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	11
PHF12	6	H2AFY	1	affinity chromatography technology	Varier RA (2016)	1
GATAD1	0	ZNF143	0	affinity chromatography technology	Varier RA (2016)	1
BRCA1	7	HSPB1	2	affinity chromatography technology	Ertych N (2016)	1
RBBP7	1	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	4
GATAD1	0	QSER1	7	affinity chromatography technology	Varier RA (2016)	1
PHF12	6	RBFOX1	1	affinity chromatography technology	Varier RA (2016)	1
GATAD1	0	RBFOX2	5	affinity chromatography technology	Varier RA (2016)	1
HSPB1	2	TUBA4A	1	biochemical	Wan C (2015)	1
HIST3H3	0	PHF12	6	unspecified method	Vermeulen M (2010)	1
BRCA1	7	ABCF2	3	affinity chromatography technology	Hill SJ (2014)	1
GATAD1	0	MORF4L1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
EMSY	3	ZNF131	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Varier RA (2016), Varier RA (2016), Varier RA (2016), Varier RA (2016), Varier RA (2016)	5
BRCA1	7	HDAC1	4	pull down	Yarden RI (1999)	1
HIST3H3	0	MORF4L1	1	unspecified method	Vermeulen M (2010)	1
HIST3H3	0	KDM5A	6	unspecified method	Vermeulen M (2010)	1
GATAD1	0	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Varier RA (2016), Varier RA (2016), Varier RA (2016)	5
RBFOX2	5	GPATCH8	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HIST3H3	0	RBBP7	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method	Campos EI (2010), Campos EI (2010), Campos EI (2010), Yoon HG (2005), Li X (2012)	5
RBFOX1	1	RBFOX2	5	two hybrid, affinity chromatography technology	Lim J (2006), Lim J (2006)	2
GATAD1	0	ZNF335	3	affinity chromatography technology	Varier RA (2016)	1
MORF4L1	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Huttlin EL (2015), Huttlin EL (2017)	4
KDM5A	6	HDAC2	1	affinity chromatography technology	Hayakawa T (2007)	1
HDAC2	1	HIST3H3	0	enzymatic study	Shi Y (2003)	1
PHF12	6	ZNF131	0	affinity chromatography technology, affinity chromatography technology	Varier RA (2016), Varier RA (2016)	2
SAP30	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huang NE (2003), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Zhang Y (1999), Swanson KA (2004), Yochum GS (2001), Kuzmichev A (2002), Kuzmichev A (2002), Viiri KM (2006), Binda O (2008), Lai A (2001), Skowyra D (2001), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	24
MORF4L2	0	SIN3A	13	affinity chromatography technology	Yochum GS (2002)	1
SIN3B	5	EMSY	3	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016)	2
PHF12	6	SPICE1	2	affinity chromatography technology	Hein MY (2015)	1
EMSY	3	RBBP7	1	affinity chromatography technology	Varier RA (2016)	1
BRCA1	7	DNAJA3	2	unspecified method	Rodriguez M (2003)	1
GATAD1	0	SIN3A	13	affinity chromatography technology	Varier RA (2016)	1
HIST3H3	0	EMSY	3	unspecified method	Vermeulen M (2010)	1
HDAC1	4	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
MORF4L1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Hayakawa T (2007), Hayakawa T (2010), Doyon Y (2004), Wan C (2015)	4
EMSY	3	MORF4L2	0	affinity chromatography technology	Varier RA (2016)	1
RBBP7	1	BRCA1	7	affinity chromatography technology, two hybrid, pull down, far western blotting, pull down	Chen GC (2001), Chen GC (2001), Yarden RI (2001), Yarden RI (2001), Yarden RI (1999)	5
BRCA1	7	MORF4L2	0	affinity chromatography technology	Hill SJ (2014)	1
PHF12	6	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016), Varier RA (2016)	3
PHF12	6	DPM1	1	affinity chromatography technology	Varier RA (2016)	1
PHF12	6	BAG2	0	affinity chromatography technology	Varier RA (2016)	1
ZNF131	0	ZNF281	1	affinity chromatography technology	Varier RA (2016)	1
PHF12	6	SENP1	0	affinity chromatography technology	Varier RA (2016)	1
PHF12	6	KDM5A	6	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016)	2
H2AFY	1	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ouararhni K (2006), Chakravarthy S (2005), Chakravarthy S (2005), Wu C (2007), Wu C (2007)	5
MORF4L1	1	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Varier RA (2016), Huttlin EL (2017)	3
RBBP7	1	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Kuzmichev A (2002), Nakamura T (2002), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	6
HIST3H3	0	SIN3B	5	unspecified method	Vermeulen M (2010)	1
PHF12	6	S100A4	0	affinity chromatography technology	Hein MY (2015)	1
ZNF335	3	EMSY	3	affinity chromatography technology	Garapaty S (2009)	1
GATAD1	0	SAP30	1	affinity chromatography technology	Varier RA (2016)	1
GATAD1	0	ZNF131	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Varier RA (2016), Varier RA (2016), Varier RA (2016), Varier RA (2016)	4
PHF12	6	QSER1	7	affinity chromatography technology	Varier RA (2016)	1
HDAC2	1	H2AFY	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Chakravarthy S (2005), Wu C (2007), Wu C (2007)	3
GATAD1	0	GPATCH8	5	affinity chromatography technology	Varier RA (2016)	1
PHF12	6	ZNF335	3	affinity chromatography technology	Varier RA (2016)	1
GATAD1	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
SAP30	1	SIN3B	5	biochemical, affinity chromatography technology, affinity chromatography technology	Zhang Y (1999), Hein MY (2015), Hein MY (2015)	3
SAP30	1	PHF12	6	affinity chromatography technology	Yochum GS (2001)	1
SIN3B	5	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Romm E (2005), Bantscheff M (2011)	2
MORF4L2	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2010), Wan C (2015)	4
HDAC2	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Adenuga D (2010), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Hauri S (2016)	9
PHF12	6	HSPB1	2	affinity chromatography technology	Varier RA (2016)	1
GATAD1	0	ZNF281	1	affinity chromatography technology	Varier RA (2016)	1
MORF4L2	0	ZNF131	0	affinity chromatography technology	Hayakawa T (2007)	1
ZNF131	0	SIN3B	5	affinity chromatography technology	Varier RA (2016)	1
HIST3H3	0	SIN3A	13	unspecified method	Vermeulen M (2010)	1
MORF4L2	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010)	2
HDAC1	4	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	4
GATAD1	0	PHF12	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Hein MY (2015), Varier RA (2016), Varier RA (2016)	5
EMSY	3	CHD9	5	affinity chromatography technology	Varier RA (2016)	1
KDM5A	6	SIN3B	5	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hein MY (2015)	2
BRCA1	7	PHF12	6	two hybrid	Woods NT (2012)	1
PHF12	6	CHD9	5	affinity chromatography technology	Varier RA (2016)	1
SAP30	1	HDAC2	1	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1999), Kuzmichev A (2002), Viiri KM (2006), Lai A (2001), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Bantscheff M (2011), Hein MY (2015)	11
HDAC1	4	RBBP7	1	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Ng HH (1999), Zhang Y (1999), Zhang Y (1997), Banach-Orlowska M (2009), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Wan C (2015), Hein MY (2015), Yeh HH (2015), Yeh HH (2015), Huttlin EL (2017), Hauri S (2016)	19
MORF4L1	1	PHF12	6	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kumar GS (2011), Hayakawa T (2007), Hayakawa T (2010), Sy SM (2009), Rolland T (2014), Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	9
GATAD1	0	RBFOX1	1	affinity chromatography technology	Varier RA (2016)	1
SIN3A	13	PHF12	6	two hybrid, affinity chromatography technology, two hybrid, x-ray crystallography, pull down	Yochum GS (2001), Yochum GS (2001), Yochum GS (2001), Kumar GS (2011), Kumar GS (2011)	5
S100A4	0	DNAJA3	2	affinity chromatography technology	Hein MY (2015)	1
PHF12	6	TUBB8	2	affinity chromatography technology	Varier RA (2016)	1
HDAC2	1	SENP1	0	affinity chromatography technology	Brandl A (2012)	1
MORF4L2	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010)	2
MORF4L1	1	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Sy SM (2009), Huttlin EL (2015), Huttlin EL (2017)	5
MORF4L1	1	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2007), Huttlin EL (2015), Huttlin EL (2017)	5
BRCA1	7	CHD9	5	affinity chromatography technology	Ertych N (2016)	1
ZNF131	0	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Varier RA (2016), Varier RA (2016), Varier RA (2016)	3
PHF12	6	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yochum GS (2001), Joshi P (2013), Hein MY (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	6
HDAC2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Fleischer TC (2003), Fleischer TC (2003), Hakimi MA (2003), Yang L (2003), Laherty CD (1997), Zhang Y (2002), Tong JK (1998), Zhang Y (2005), Nakamura T (2002), Sekhavat A (2007), Zou J (2004), Sun JM (2007), Xue Y (1998), Tsai SC (2002), Brandl A (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hsu DS (2014)	20
HSPB1	2	S100A4	0	two hybrid	Katsogiannou M (2014)	1
RBBP7	1	KDM5A	6	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PHF12	6	ZNF143	0	affinity chromatography technology	Varier RA (2016)	1