PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000595404	[[43715942, 43716627], [43762353, 43762608], [43763008, 43764898]]	None
ENST00000418820	[[43715942, 43716627], [43762353, 43762608], [43763008, 43763287], [43771935, 43772301], [43773519, 43773682]]	[[43716610, 43716627], [43762353, 43762608], [43763008, 43763287], [43771935, 43772301], [43773519, 43773583]]
ENST00000593948	[[43757430, 43757798], [43762353, 43762608], [43766011, 43766290], [43771935, 43772301], [43773519, 43773680]]	[[43757760, 43757798], [43762353, 43762608], [43766011, 43766290], [43771935, 43772301], [43773519, 43773583]]
ENST00000270077	[[43757433, 43757798], [43762353, 43762608], [43763008, 43763287], [43766011, 43766290], [43771935, 43772301], [43773519, 43773680]]	[[43757760, 43757798], [43762353, 43762608], [43763008, 43763287], [43766011, 43766290], [43771935, 43772301], [43773519, 43773583]]
ENST00000291752	[[43757434, 43757798], [43762353, 43762608], [43771935, 43772301], [43773519, 43773589]]	[[43757760, 43757798], [43762353, 43762608], [43771935, 43772301], [43773519, 43773583]]
ENST00000443718	[[43757438, 43757798], [43762353, 43762608], [43763008, 43763287], [43771935, 43772301], [43773519, 43773680]]	[[43757760, 43757798], [43762353, 43762608], [43763008, 43763287], [43771935, 43772301], [43773519, 43773583]]
ENST00000244293	[[43761311, 43762608], [43766011, 43766290], [43771935, 43772301], [43773519, 43773650]]	[[43762108, 43762608], [43766011, 43766290], [43771935, 43772301], [43773519, 43773583]]
ENST00000596730	[[43761316, 43762608], [43771935, 43772301], [43773519, 43773673]]	[[43762108, 43762608], [43771935, 43772301], [43773519, 43773583]]
NM_002784	[[43757433, 43757798], [43762353, 43762608], [43763008, 43763287], [43766011, 43766290], [43771935, 43772301], [43773519, 43773715]]	[[43757760, 43757798], [43762353, 43762608], [43763008, 43763287], [43766011, 43766290], [43771935, 43772301], [43773519, 43773583]]
NM_001301708	[[43757433, 43757798], [43762353, 43762608], [43766011, 43766290], [43771935, 43772301], [43773519, 43773715]]	[[43757760, 43757798], [43762353, 43762608], [43766011, 43766290], [43771935, 43772301], [43773519, 43773583]]
NM_001301707	[[43757433, 43757798], [43762353, 43762608], [43763008, 43763287], [43771935, 43772301], [43773519, 43773715]]	[[43757760, 43757798], [43762353, 43762608], [43763008, 43763287], [43771935, 43772301], [43773519, 43773583]]
NM_001301709	[[43757433, 43757798], [43762353, 43762608], [43771935, 43772301], [43773519, 43773715]]	[[43757760, 43757798], [43762353, 43762608], [43771935, 43772301], [43773519, 43773583]]

Promoter

Chrom	Start	End	Description
chr19	43772273	43772297	CAGE_peak_2_at_PSG9_5end
chr19	43773641	43773691	CAGE_peak_1_at_PSG9_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I043263	43263938	43269598	1.58	[{'connected_gene': 'PSG9', 'score': 550.77}, {'connected_gene': 'PSG4', 'score': 24.06}, {'connected_gene': 'LOC100505715', 'score': 15.85}, {'connected_gene': 'ZNF428', 'score': 13.66}, {'connected_gene': 'ZNF575', 'score': 13.43}, {'connected_gene': 'LOC100379224', 'score': 12.64}, {'connected_gene': 'MEGF8', 'score': 12.24}, {'connected_gene': 'ZNF404', 'score': 11.62}, {'connected_gene': 'ZNF576', 'score': 11.3}, {'connected_gene': 'PSG5', 'score': 11.15}, {'connected_gene': 'IRGQ', 'score': 9.89}, {'connected_gene': 'ENSG00000231412', 'score': 8.21}, {'connected_gene': 'CEACAMP10', 'score': 0.37}, {'connected_gene': 'LOC284344', 'score': 0.37}]