PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000374806	[[104353896, 104357283]]	[[104356690, 104357212]]
NM_147180	[[104353896, 104357283]]	[[104356690, 104357212]]

Promoter

Chrom	Start	End	Description
chr9	104357199	104357274	CAGE_peak_1_at_PPP3R2_5end
chr9	104357277	104357287	CAGE_peak_2_at_PPP3R2_5end
chr9	104357462	104357475	CAGE_peak_3_at_PPP3R2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I101569	101569397	101570711	0.52	[{'connected_gene': 'TMEM246', 'score': 10.92}, {'connected_gene': 'RNF20', 'score': 10.92}, {'connected_gene': 'PPP3R2', 'score': 10.92}, {'connected_gene': 'PIR43226', 'score': 0.34}, {'connected_gene': 'GRIN3A', 'score': 0.1}]
chr9	GH09I101594	101594959	101595018	0.5	[{'connected_gene': 'PPP3R2', 'score': 550.77}, {'connected_gene': 'PIR59715', 'score': 550.77}, {'connected_gene': 'PIR43226', 'score': 550.77}, {'connected_gene': 'LOC105376186', 'score': 550.77}, {'connected_gene': 'GC09P101598', 'score': 550.77}, {'connected_gene': 'PIR31501', 'score': 550.77}, {'connected_gene': 'GRIN3A', 'score': 0.11}]
chr9	GH09I101673	101673199	101674550	0.31	[{'connected_gene': 'GRIN3A', 'score': 10.49}, {'connected_gene': 'PPP3R2', 'score': 10.4}, {'connected_gene': 'TMEM246-AS1', 'score': 5.05}, {'connected_gene': 'GC09P101627', 'score': 0.25}]
chr9	GH09I101222	101222731	101222849	0.22	[{'connected_gene': 'LOC105376183', 'score': 550.77}, {'connected_gene': 'PPP3R2', 'score': 7.34}, {'connected_gene': 'PLPPR1', 'score': 2.17}, {'connected_gene': 'RNF20', 'score': 1.22}, {'connected_gene': 'LOC105376182', 'score': 0.37}]