PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000332700	[[45408454, 45410401], [45417489, 45417677], [45429801, 45429897], [45444307, 45444882]]	[[45410068, 45410401], [45417489, 45417677], [45429801, 45429897], [45444307, 45444710]]
NM_001004329	[[45408538, 45410401], [45417489, 45417677], [45429801, 45429897], [45444307, 45444882]]	[[45410068, 45410401], [45417489, 45417677], [45429801, 45429897], [45444307, 45444710]]

Promoter

Chrom	Start	End	Description
chr12	45444856	45444867	CAGE_peak_2_at_DBX2_5end
chr12	45444873	45444888	CAGE_peak_1_at_DBX2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I044551	44551207	44551538	0.23	[{'connected_gene': 'TMEM117', 'score': 4.42}, {'connected_gene': 'NELL2', 'score': 3.66}, {'connected_gene': 'DBX2', 'score': 1.28}, {'connected_gene': 'ENSG00000275286', 'score': 0.23}, {'connected_gene': 'GC12M044560', 'score': 0.13}]
chr12	GH12I044889	44889436	44890492	0.72	[{'connected_gene': 'NELL2', 'score': 19.89}, {'connected_gene': 'DBX2', 'score': 5.58}, {'connected_gene': 'GC12M044881', 'score': 0.44}, {'connected_gene': 'ENSG00000201788', 'score': 0.44}, {'connected_gene': 'GC12M044877', 'score': 0.39}]
chr12	GH12I044842	44842669	44842833	0.48	[{'connected_gene': 'NELL2', 'score': 8.45}, {'connected_gene': 'DBX2', 'score': 1.43}, {'connected_gene': 'GC12M044833', 'score': 0.44}, {'connected_gene': 'GC12M044853', 'score': 0.37}]
chr12	GH12I044846	44846800	44849097	1.32	[{'connected_gene': 'NELL2', 'score': 17.25}, {'connected_gene': 'DBX2', 'score': 14.93}, {'connected_gene': 'GC12M044833', 'score': 0.39}, {'connected_gene': 'GC12M044853', 'score': 0.39}]
chr12	GH12I044874	44874808	44877187	2.29	[{'connected_gene': 'NELL2', 'score': 566.41}, {'connected_gene': 'DBX2', 'score': 15.0}, {'connected_gene': 'GC12M044881', 'score': 0.77}, {'connected_gene': 'ENSG00000201788', 'score': 0.77}, {'connected_gene': 'GC12M044853', 'score': 0.37}]
chr12	GH12I045076	45076492	45077987	0.52	[{'connected_gene': 'DBX2', 'score': 19.69}, {'connected_gene': 'NELL2', 'score': 8.52}, {'connected_gene': 'LOC100533757', 'score': 0.44}, {'connected_gene': 'ENSG00000257319', 'score': 0.31}, {'connected_gene': 'GC12P045114', 'score': 0.28}]
chr12	GH12I044851	44851460	44854551	0.38	[{'connected_gene': 'DBX2', 'score': 14.19}, {'connected_gene': 'NELL2', 'score': 7.0}, {'connected_gene': 'GC12M044853', 'score': 0.44}, {'connected_gene': 'GC12M044833', 'score': 0.37}]
chr12	GH12I044819	44819614	44820487	0.2	[{'connected_gene': 'DBX2', 'score': 5.03}, {'connected_gene': 'GC12M044826', 'score': 0.44}, {'connected_gene': 'NELL2', 'score': 0.15}, {'connected_gene': 'GC12M044702', 'score': 0.14}]
chr12	GH12I045205	45205601	45206400	0.72	[{'connected_gene': 'DBX2', 'score': 4.64}, {'connected_gene': 'ANO6', 'score': 0.44}, {'connected_gene': 'LOC100419293', 'score': 0.44}, {'connected_gene': 'PLEKHA8P1', 'score': 0.39}]
chr12	GH12I045089	45089845	45090083	0.4	[{'connected_gene': 'DBX2', 'score': 11.33}, {'connected_gene': 'LOC100533757', 'score': 0.37}, {'connected_gene': 'GC12P045114', 'score': 0.34}, {'connected_gene': 'ENSG00000257319', 'score': 0.28}]
chr12	GH12I045051	45051069	45051128	0.98	[{'connected_gene': 'DBX2', 'score': 550.77}, {'connected_gene': 'ENSG00000257319', 'score': 550.77}]
chr12	GH12I045034	45034510	45034809	0.4	[{'connected_gene': 'LOC105369742', 'score': 550.77}, {'connected_gene': 'DBX2', 'score': 0.37}, {'connected_gene': 'GC12M044982', 'score': 0.26}]