PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000376395	[[86274877, 86276854], [86278789, 86278958], [86279944, 86280060], [86281264, 86281348], [86284099, 86284242], [86292641, 86292876], [86293355, 86293514], [86294689, 86294952], [86297865, 86297981], [86300918, 86301070], [86322414, 86323118]]	[[86276701, 86276854], [86278789, 86278958], [86279944, 86280060], [86281264, 86281348], [86284099, 86284242], [86292641, 86292876], [86293355, 86293514], [86294689, 86294952], [86297865, 86297981], [86300918, 86301070], [86322414, 86322594]]
ENST00000533705	[[86274885, 86276854], [86278789, 86278958], [86279944, 86280060], [86281264, 86284242], [86292641, 86292876], [86293355, 86293514], [86294689, 86294952], [86297865, 86297981], [86300918, 86300968]]	None
ENST00000257468	[[86276343, 86276854], [86278789, 86278958], [86279944, 86280060], [86284099, 86284242], [86292641, 86292876], [86293355, 86293514], [86294689, 86294952], [86297865, 86297981], [86300918, 86301070], [86322414, 86322849]]	[[86276701, 86276854], [86278789, 86278958], [86279944, 86280060], [86284099, 86284242], [86292641, 86292876], [86293355, 86293514], [86294689, 86294952], [86297865, 86297981], [86300918, 86301070], [86322414, 86322594]]
ENST00000526134	[[86276816, 86276854], [86278789, 86278958], [86279944, 86280060], [86281264, 86281309], [86284099, 86284206]]	[[86276816, 86276854], [86278789, 86278958], [86279944, 86280060], [86281264, 86281309], [86284099, 86284206]]
ENST00000527373	[[86276825, 86276854], [86278789, 86278958], [86279944, 86280308]]	None
ENST00000529923	[[86292666, 86292876], [86293355, 86293514], [86322414, 86322516]]	[[86292666, 86292876], [86293355, 86293514], [86322414, 86322516]]
NM_013438	[[86274877, 86276854], [86278789, 86278958], [86279944, 86280060], [86281264, 86281348], [86284099, 86284242], [86292641, 86292876], [86293355, 86293514], [86294689, 86294952], [86297865, 86297981], [86300918, 86301070], [86322414, 86323168]]	[[86276701, 86276854], [86278789, 86278958], [86279944, 86280060], [86281264, 86281348], [86284099, 86284242], [86292641, 86292876], [86293355, 86293514], [86294689, 86294952], [86297865, 86297981], [86300918, 86301070], [86322414, 86322594]]
NM_053067	[[86274877, 86276854], [86278789, 86278958], [86279944, 86280060], [86284099, 86284242], [86292641, 86292876], [86293355, 86293514], [86294689, 86294952], [86297865, 86297981], [86300918, 86301070], [86322414, 86323168]]	[[86276701, 86276854], [86278789, 86278958], [86279944, 86280060], [86284099, 86284242], [86292641, 86292876], [86293355, 86293514], [86294689, 86294952], [86297865, 86297981], [86300918, 86301070], [86322414, 86322594]]

Promoter

Chrom	Start	End	Description
chr9	86322592	86322632	CAGE_peak_2_at_UBQLN1_5end
chr9	86322808	86322826	CAGE_peak_3_at_UBQLN1_5end
chr9	86322831	86322906	CAGE_peak_1_at_UBQLN1_5end
chr9	86322912	86322923	CAGE_peak_4_at_UBQLN1_5end
chr9	86323008	86323021	CAGE_peak_7_at_UBQLN1_5end
chr9	86323128	86323164	CAGE_peak_5_at_UBQLN1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I083508	83508146	83508295	0.64	[{'connected_gene': 'KIF27', 'score': 4.71}, {'connected_gene': 'HNRNPK', 'score': 1.74}, {'connected_gene': 'UBQLN1', 'score': 1.26}, {'connected_gene': 'PIR58953', 'score': 0.77}, {'connected_gene': 'GC09M083513', 'score': 0.77}, {'connected_gene': 'FRMD3', 'score': 0.29}, {'connected_gene': 'GC09M083455', 'score': 0.21}]
chr9	GH09I083620	83620773	83626063	2.66	[{'connected_gene': 'IDNK', 'score': 562.26}, {'connected_gene': 'LOC105376114', 'score': 27.05}, {'connected_gene': 'KIF27', 'score': 22.06}, {'connected_gene': 'UBQLN1', 'score': 5.9}, {'connected_gene': 'GKAP1', 'score': 1.43}, {'connected_gene': 'GC09M083666', 'score': 0.21}]
chr9	GH09I083665	83665318	83666514	0.2	[{'connected_gene': 'LOC105376114', 'score': 39.38}, {'connected_gene': 'IDNK', 'score': 17.26}, {'connected_gene': 'UBQLN1', 'score': 11.68}, {'connected_gene': 'GC09M083666', 'score': 0.37}]
chr9	GH09I083699	83699401	83700000	0.2	[{'connected_gene': 'LOC105376114', 'score': 29.21}, {'connected_gene': 'IDNK', 'score': 11.13}, {'connected_gene': 'UBQLN1', 'score': 0.44}, {'connected_gene': 'GC09M083666', 'score': 0.39}]
chr9	GH09I083633	83633221	83634311	0.38	[{'connected_gene': 'LOC105376114', 'score': 27.48}, {'connected_gene': 'IDNK', 'score': 6.11}, {'connected_gene': 'UBQLN1', 'score': 5.12}, {'connected_gene': 'GC09M083666', 'score': 0.23}]
chr9	GH09I083705	83705512	83709453	2.29	[{'connected_gene': 'LOC105376114', 'score': 582.31}, {'connected_gene': 'UBQLN1', 'score': 550.77}, {'connected_gene': 'HNRNPK', 'score': 20.14}, {'connected_gene': 'KIF27', 'score': 12.64}, {'connected_gene': 'IDNK', 'score': 10.51}, {'connected_gene': 'GC09M083666', 'score': 0.34}]
chr9	GH09I083701	83701321	83702515	0.74	[{'connected_gene': 'LOC105376114', 'score': 27.91}, {'connected_gene': 'UBQLN1', 'score': 0.44}, {'connected_gene': 'GC09M083666', 'score': 0.37}]
chr9	GH09I083641	83641306	83642062	0.2	[{'connected_gene': 'LOC105376114', 'score': 12.77}, {'connected_gene': 'LOC105376116', 'score': 9.27}, {'connected_gene': 'IDNK', 'score': 5.87}, {'connected_gene': 'UBQLN1', 'score': 5.13}, {'connected_gene': 'GC09M083666', 'score': 0.26}]