PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000296233	[[126061477, 126062738], [126070683, 126071790], [126076079, 126076285]]	[[126062569, 126062738], [126070683, 126071765]]
ENST00000509675	[[126071517, 126071790], [126072854, 126073128]]	None
NM_014079	[[126061477, 126062738], [126070683, 126071790], [126076079, 126076236]]	[[126062569, 126062738], [126070683, 126071765]]

Promoter

Chrom	Start	End	Description
chr3	126072932	126072949	CAGE_peak_9_at_KLF15_5end
chr3	126072967	126072981	CAGE_peak_4_at_KLF15_5end
chr3	126073018	126073036	CAGE_peak_3_at_KLF15_5end
chr3	126076242	126076257	CAGE_peak_1_at_KLF15_5end
chr3	126076264	126076305	CAGE_peak_2_at_KLF15_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I126407	126407837	126408024	0.41	[{'connected_gene': 'KLF15', 'score': 10.63}, {'connected_gene': 'CFAP100', 'score': 0.39}, {'connected_gene': 'LOC105374089', 'score': 0.31}]
chr3	GH03I126338	126338246	126342691	0.83	[{'connected_gene': 'KLF15', 'score': 5.64}, {'connected_gene': 'CFAP100', 'score': 4.96}, {'connected_gene': 'LOC105374088', 'score': 0.31}, {'connected_gene': 'GC03P126153', 'score': 0.09}]
chr3	GH03I126259	126259098	126260000	0.96	[{'connected_gene': 'KLF15', 'score': 10.58}, {'connected_gene': 'ALDH1L1', 'score': 4.42}, {'connected_gene': 'PIR51646', 'score': 0.44}, {'connected_gene': 'ENSG00000250934', 'score': 0.44}, {'connected_gene': 'GC03P126153', 'score': 0.14}]
chr3	GH03I126352	126352104	126352466	0.43	[{'connected_gene': 'KLF15', 'score': 0.44}, {'connected_gene': 'LOC105374088', 'score': 0.28}]
chr3	GH03I126343	126343058	126343490	0.63	[{'connected_gene': 'KLF15', 'score': 0.39}, {'connected_gene': 'LOC105374088', 'score': 0.29}, {'connected_gene': 'GC03P126153', 'score': 0.08}]
chr3	GH03I126344	126344346	126344994	0.31	[{'connected_gene': 'KLF15', 'score': 0.39}, {'connected_gene': 'LOC105374088', 'score': 0.29}, {'connected_gene': 'GC03P126153', 'score': 0.08}]
chr3	GH03I126314	126314088	126314933	0.49	[{'connected_gene': 'KLF15', 'score': 11.7}, {'connected_gene': 'ENSG00000250934', 'score': 5.98}, {'connected_gene': 'LOC105374088', 'score': 0.77}, {'connected_gene': 'GC03P126153', 'score': 0.1}]
chr3	GH03I126353	126353025	126358521	2.68	[{'connected_gene': 'KLF15', 'score': 566.7}, {'connected_gene': 'LOC101927056', 'score': 13.88}, {'connected_gene': 'ALDH1L1', 'score': 6.58}, {'connected_gene': 'OR7E29P', 'score': 5.38}, {'connected_gene': 'CFAP100', 'score': 1.64}, {'connected_gene': 'UROC1', 'score': 1.5}, {'connected_gene': 'LOC105374088', 'score': 0.26}]
chr3	GH03I126207	126207642	126209557	1.08	[{'connected_gene': 'KLF15', 'score': 10.1}, {'connected_gene': 'ALDH1L1-AS2', 'score': 6.78}, {'connected_gene': 'ALDH1L1', 'score': 6.47}, {'connected_gene': 'LOC105374086', 'score': 0.77}, {'connected_gene': 'GC03P126153', 'score': 0.22}]
chr3	GH03I126287	126287037	126288408	0.94	[{'connected_gene': 'KLF15', 'score': 10.33}, {'connected_gene': 'ENSG00000250934', 'score': 5.43}, {'connected_gene': 'ENSG00000251448', 'score': 0.44}, {'connected_gene': 'GC03P126153', 'score': 0.12}]
chr3	GH03I126277	126277362	126278641	0.43	[{'connected_gene': 'KLF15', 'score': 10.83}, {'connected_gene': 'ENSG00000250934', 'score': 7.66}, {'connected_gene': 'ENSG00000251448', 'score': 0.37}, {'connected_gene': 'GC03P126153', 'score': 0.13}]
chr3	GH03I126178	126178449	126182014	2.07	[{'connected_gene': 'ALDH1L1-AS2', 'score': 555.19}, {'connected_gene': 'ALDH1L1', 'score': 550.37}, {'connected_gene': 'KLF15', 'score': 9.41}, {'connected_gene': 'GC03P126153', 'score': 0.31}]
chr3	GH03I126373	126373791	126374436	0.72	[{'connected_gene': 'CCDC37-AS1', 'score': 16.0}, {'connected_gene': 'CFAP100', 'score': 11.38}, {'connected_gene': 'KLF15', 'score': 0.37}]
chr3	GH03I126388	126388675	126390106	1.15	[{'connected_gene': 'CCDC37-AS1', 'score': 23.51}, {'connected_gene': 'KLF15', 'score': 11.26}]
chr3	GH03I126364	126364087	126364719	0.31	[{'connected_gene': 'CCDC37-AS1', 'score': 5.15}, {'connected_gene': 'KLF15', 'score': 0.44}]
chr3	GH03I126266	126266196	126269629	1.3	[{'connected_gene': 'ENSG00000250934', 'score': 550.77}, {'connected_gene': 'KLF15', 'score': 10.38}, {'connected_gene': 'CFAP100', 'score': 9.96}, {'connected_gene': 'CCDC37-AS1', 'score': 9.96}, {'connected_gene': 'ALDH1L1', 'score': 9.93}, {'connected_gene': 'ALDH1L1-AS2', 'score': 7.04}, {'connected_gene': 'ENPP7P4', 'score': 4.83}, {'connected_gene': 'ENSG00000251448', 'score': 0.31}, {'connected_gene': 'GC03P126153', 'score': 0.14}]
chr3	GH03I126304	126304501	126305851	0.31	[{'connected_gene': 'ENSG00000250934', 'score': 6.51}, {'connected_gene': 'KLF15', 'score': 6.31}, {'connected_gene': 'LOC105374088', 'score': 0.44}, {'connected_gene': 'ENSG00000251448', 'score': 0.39}, {'connected_gene': 'GC03P126153', 'score': 0.1}]
chr3	GH03I126301	126301238	126301387	0.92	[{'connected_gene': 'ENSG00000250934', 'score': 6.54}, {'connected_gene': 'KLF15', 'score': 6.13}, {'connected_gene': 'ENSG00000251448', 'score': 0.44}, {'connected_gene': 'LOC105374088', 'score': 0.39}, {'connected_gene': 'GC03P126153', 'score': 0.11}]
chr3	GH03I126375	126375000	126375359	0.2	[{'connected_gene': 'ENSG00000239804', 'score': 5.07}, {'connected_gene': 'KLF15', 'score': 0.37}, {'connected_gene': 'CCDC37-AS1', 'score': 0.37}]