PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000316610	[[89754019, 89757369], [89769655, 89770585]]	[[89756983, 89757369], [89769655, 89770109]]
ENST00000514906	[[89768259, 89770195]]	[[89769509, 89770109]]
NM_203406	[[89754019, 89757369], [89769655, 89770585]]	[[89756983, 89757369], [89769655, 89770109]]

Promoter

Chrom	Start	End	Description
chr5	89770171	89770258	CAGE_peak_2_at_MBLAC2_5end
chr5	89770430	89770441	CAGE_peak_8_at_MBLAC2_5end
chr5	89770470	89770485	CAGE_peak_4_at_MBLAC2_5end
chr5	89770522	89770539	CAGE_peak_6_at_MBLAC2_5end
chr5	89770542	89770574	CAGE_peak_1_at_MBLAC2_5end
chr5	89770582	89770603	CAGE_peak_3_at_MBLAC2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I090439	90439552	90440600	0.97	[{'connected_gene': 'ADGRV1', 'score': 11.76}, {'connected_gene': 'LYSMD3', 'score': 11.76}, {'connected_gene': 'POLR3G', 'score': 11.55}, {'connected_gene': 'MBLAC2', 'score': 11.24}, {'connected_gene': 'LOC731157', 'score': 10.79}, {'connected_gene': 'CETN3', 'score': 10.79}]
chr5	GH05I090020	90020567	90022350	1.09	[{'connected_gene': 'MBLAC2', 'score': 11.18}, {'connected_gene': 'ENSG00000260871', 'score': 10.86}, {'connected_gene': 'LYSMD3', 'score': 10.52}, {'connected_gene': 'CETN3', 'score': 9.68}, {'connected_gene': 'MIR3660', 'score': 0.77}, {'connected_gene': 'GC05M090101', 'score': 0.18}]
chr5	GH05I090482	90482658	90482717	0.61	[{'connected_gene': 'POLR3G', 'score': 550.39}, {'connected_gene': 'ADGRV1', 'score': 11.02}, {'connected_gene': 'LYSMD3', 'score': 11.02}, {'connected_gene': 'MBLAC2', 'score': 0.44}]
chr5	GH05I090472	90472740	90478253	2.3	[{'connected_gene': 'POLR3G', 'score': 557.32}, {'connected_gene': 'MBLAC2', 'score': 550.77}, {'connected_gene': 'ADGRV1', 'score': 0.23}]
chr5	GH05I091310	91310046	91315799	1.45	[{'connected_gene': 'ENSG00000271762', 'score': 550.77}, {'connected_gene': 'LUCAT1', 'score': 550.77}, {'connected_gene': 'GC05P091311', 'score': 550.77}, {'connected_gene': 'RPS18P7', 'score': 13.08}, {'connected_gene': 'ENSG00000241059', 'score': 13.08}, {'connected_gene': 'MBLAC2', 'score': 12.51}, {'connected_gene': 'ARRDC3', 'score': 12.23}, {'connected_gene': 'ENSG00000277001', 'score': 0.77}]