PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000182096	[[97595818, 97596881], [97598547, 97598592], [97598828, 97598944], [97599915, 97600063], [97605474, 97605611], [97607184, 97607299], [97608198, 97608234], [97611703, 97611837], [97614802, 97614929], [97617726, 97617869], [97617980, 97618107], [97619296, 97619329], [97631010, 97631120], [97634453, 97634580], [97652537, 97652677], [97655628, 97655752], [97659991, 97660150], [97661127, 97661287], [97662069, 97663807]]	[[97595882, 97596881], [97598547, 97598592], [97598828, 97598944], [97599915, 97600063], [97605474, 97605611], [97607184, 97607299], [97608198, 97608234], [97611703, 97611837], [97614802, 97614929], [97617726, 97617869], [97617980, 97618107], [97619296, 97619329], [97631010, 97631120], [97634453, 97634580], [97652537, 97652677], [97655628, 97655752], [97659991, 97660150], [97661127, 97661287], [97662069, 97662158]]
ENST00000495403	[[97643055, 97643255], [97652537, 97652677], [97655628, 97655752], [97659991, 97660105]]	[[97643240, 97643255], [97652537, 97652677], [97655628, 97655752], [97659991, 97660105]]
ENST00000485253	[[97643055, 97643255], [97652537, 97652677], [97655628, 97655752], [97659991, 97660150], [97661127, 97661287], [97662069, 97662414], [97663677, 97663801]]	None
ENST00000389622	[[97651955, 97651967], [97652345, 97652351], [97652537, 97652677], [97655628, 97655752], [97659991, 97660150], [97661127, 97661287], [97662069, 97663810]]	[[97651955, 97651967], [97652345, 97652351], [97652537, 97652677], [97655628, 97655752], [97659991, 97660150], [97661127, 97661287], [97662069, 97662158]]
NM_153605	[[97540883, 97541199], [97562038, 97562105], [97583060, 97583491], [97590685, 97596881], [97598547, 97598592], [97598828, 97598944], [97599915, 97600063], [97605474, 97605611], [97607184, 97607299], [97608198, 97608234], [97611703, 97611837], [97614802, 97614929], [97617726, 97617869], [97617980, 97618107], [97619296, 97619329], [97631010, 97631120], [97634453, 97634580], [97652537, 97652677], [97655628, 97655752], [97659991, 97660150], [97661127, 97661287], [97662069, 97663830]]	[[97541050, 97541199], [97562038, 97562105], [97583060, 97583491], [97590685, 97596881], [97598547, 97598592], [97598828, 97598944], [97599915, 97600063], [97605474, 97605611], [97607184, 97607299], [97608198, 97608234], [97611703, 97611837], [97614802, 97614929], [97617726, 97617869], [97617980, 97618107], [97619296, 97619329], [97631010, 97631120], [97634453, 97634580], [97652537, 97652677], [97655628, 97655752], [97659991, 97660150], [97661127, 97661287], [97662069, 97662158]]

Promoter

Chrom	Start	End	Description
chr3	97540828	97540870	CAGE_peak_2_at_CRYBG3_5end
chr3	97540876	97540923	CAGE_peak_1_at_CRYBG3_5end
chr3	97594350	97594360	CAGE_peak_3_at_CRYBG3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I097910	97910201	97911941	1.05	[{'connected_gene': 'RIOX2', 'score': 11.43}, {'connected_gene': 'CRYBG3', 'score': 4.69}, {'connected_gene': 'LOC105373994', 'score': 0.28}]
chr3	GH03I097969	97969486	97973483	1.93	[{'connected_gene': 'RIOX2', 'score': 555.92}, {'connected_gene': 'CRYBG3', 'score': 4.61}, {'connected_gene': 'LOC105373994', 'score': 0.15}]
chr3	GH03I097882	97882579	97883401	0.72	[{'connected_gene': 'RIOX2', 'score': 15.08}, {'connected_gene': 'LOC105373994', 'score': 0.44}, {'connected_gene': 'CRYBG3', 'score': 0.21}]
chr3	GH03I098038	98038937	98039955	1.04	[{'connected_gene': 'OR5K4', 'score': 10.11}, {'connected_gene': 'CRYBG3', 'score': 9.0}, {'connected_gene': 'GABRR3', 'score': 0.77}, {'connected_gene': 'GC03P098051', 'score': 0.39}]
chr3	GH03I098035	98035305	98035364	0.79	[{'connected_gene': 'GABRR3', 'score': 550.77}, {'connected_gene': 'CRYBG3', 'score': 15.61}, {'connected_gene': 'GC03P098051', 'score': 0.37}]
chr3	GH03I097914	97914517	97914626	0.54	[{'connected_gene': 'LOC105373994', 'score': 0.28}, {'connected_gene': 'RIOX2', 'score': 0.22}, {'connected_gene': 'CRYBG3', 'score': 0.16}]
chr3	GH03I097901	97901401	97902200	0.52	[{'connected_gene': 'LOC105373994', 'score': 0.31}, {'connected_gene': 'RIOX2', 'score': 0.19}, {'connected_gene': 'CRYBG3', 'score': 0.18}]
chr3	GH03I097871	97871214	97873421	0.72	[{'connected_gene': 'LOC105373994', 'score': 0.77}, {'connected_gene': 'CRYBG3', 'score': 0.23}]
chr3	GH03I097820	97820922	97824037	2.07	[{'connected_gene': 'LOC101929298', 'score': 550.77}, {'connected_gene': 'CRYBG3', 'score': 550.77}, {'connected_gene': 'RIOX2', 'score': 10.51}, {'connected_gene': 'LOC105373994', 'score': 0.23}]