PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000545221	[[56247016, 56247940]]	[[56247016, 56247940]]
NM_001004707	[[56247016, 56247940]]	[[56247016, 56247940]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I058327	58327280	58348034	2.63	[{'connected_gene': 'TSPOAP1', 'score': 565.91}, {'connected_gene': 'MIR4736', 'score': 550.77}, {'connected_gene': 'SRSF1', 'score': 52.05}, {'connected_gene': 'MKS1', 'score': 28.81}, {'connected_gene': 'SUPT4H1', 'score': 22.33}, {'connected_gene': 'VEZF1', 'score': 21.83}, {'connected_gene': 'TRIM37', 'score': 15.01}, {'connected_gene': 'DYNLL2', 'score': 5.1}, {'connected_gene': 'TEX14', 'score': 4.62}, {'connected_gene': 'MTMR4', 'score': 3.94}, {'connected_gene': 'MPO', 'score': 3.52}, {'connected_gene': 'RAD51C', 'score': 1.76}, {'connected_gene': 'HSF5', 'score': 1.51}, {'connected_gene': 'OR4D2', 'score': 1.44}, {'connected_gene': 'MIR142', 'score': 0.44}, {'connected_gene': 'ENSG00000265206', 'score': 0.44}, {'connected_gene': 'TSPOAP1-AS1', 'score': 0.39}]
chr17	GH17I058172	58172560	58172709	0.71	[{'connected_gene': 'EPX', 'score': 11.77}, {'connected_gene': 'MKS1', 'score': 11.17}, {'connected_gene': 'OR4D2', 'score': 0.44}, {'connected_gene': 'GC17M057928', 'score': 0.39}]
chr17	GH17I058156	58156770	58158074	1.06	[{'connected_gene': 'MSX2P1', 'score': 556.57}, {'connected_gene': 'SRSF1', 'score': 16.13}, {'connected_gene': 'MKS1', 'score': 11.2}, {'connected_gene': 'OR4D2', 'score': 0.44}, {'connected_gene': 'OR4D1', 'score': 0.44}, {'connected_gene': 'GC17M057928', 'score': 0.31}]
chr17	GH17I058178	58178760	58178889	0.2	[{'connected_gene': 'MSX2P1', 'score': 12.4}, {'connected_gene': 'OR4D1', 'score': 12.35}, {'connected_gene': 'LPO', 'score': 9.95}, {'connected_gene': 'GC17M057928', 'score': 0.77}, {'connected_gene': 'OR4D2', 'score': 0.39}]
chr17	GH17I058522	58522651	58522790	0.57	[{'connected_gene': 'SEPT4', 'score': 7.87}, {'connected_gene': 'OR4D2', 'score': 4.28}, {'connected_gene': 'DYNLL2', 'score': 1.43}, {'connected_gene': 'SEPT4-AS1', 'score': 0.77}, {'connected_gene': 'GC17M058529', 'score': 0.44}]
chr17	GH17I057897	57897797	57905999	2.19	[{'connected_gene': 'CUEDC1', 'score': 568.65}, {'connected_gene': 'SRSF1', 'score': 40.87}, {'connected_gene': 'ENSG00000262298', 'score': 26.13}, {'connected_gene': 'MKS1', 'score': 20.25}, {'connected_gene': 'EPX', 'score': 9.76}, {'connected_gene': 'VEZF1', 'score': 5.1}, {'connected_gene': 'ENSG00000263004', 'score': 4.98}, {'connected_gene': 'OR4D2', 'score': 3.18}, {'connected_gene': 'ENSG00000264914', 'score': 0.39}, {'connected_gene': 'GC17P057856', 'score': 0.25}]
chr17	GH17I058169	58169430	58171131	0.81	[{'connected_gene': 'OR4D2', 'score': 550.77}, {'connected_gene': 'TSPOAP1', 'score': 4.81}, {'connected_gene': 'GC17M057928', 'score': 0.39}]
chr17	GH17I058136	58136800	58136929	0.6	[{'connected_gene': 'OR4D2', 'score': 11.95}, {'connected_gene': 'EPX', 'score': 10.83}, {'connected_gene': 'SRSF1', 'score': 10.14}, {'connected_gene': 'LPO', 'score': 9.96}, {'connected_gene': 'OR4D1', 'score': 0.39}, {'connected_gene': 'GC17P058101', 'score': 0.28}, {'connected_gene': 'GC17M057928', 'score': 0.25}]