PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
SMC3	16	MXD1	2	two hybrid, pull down	Gupta K (1998), Gupta K (1998)	2
MXD1	2	MLX	0	two hybrid, two hybrid	Cairo S (2001), Meroni G (2000)	2
MAX	0	TCP10L	0	affinity chromatography technology	Huttlin EL (2017)	1
SMC3	16	MXD4	3	two hybrid, pull down	Gupta K (1998), Gupta K (1998)	2
MLX	0	MXD4	3	two hybrid, two hybrid	Billin AN (2000), Billin AN (1999)	2
MXD4	3	MAX	0	two hybrid, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Billin AN (1999), Gupta K (1998), FitzGerald MJ (1999), Li X (2015), Cheng J (2017), Hauri S (2016)	6
MAX	0	MXD1	2	pull down, pull down, two hybrid, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lee CM (2002), Ayer DE (1993), Gupta K (1998), Nair SK (2003), Hatakeyama S (2005), Wang Z (2006), Gordan JD (2007), Ayer DE (1993), Naderi S (1999), Huttlin EL (2015), FitzGerald MJ (1999), Huttlin EL (2017), Cheng J (2017), Hauri S (2016)	14
MXD1	2	MXD4	3	affinity chromatography technology	Cheng J (2017)	1
TCP10L	0	MXD4	3	two hybrid, affinity chromatography technology, two hybrid	Jiang DJ (2004), Jiang DJ (2004), Wang J (2011)	3
SHBG	0	MXD4	3	two hybrid	Pope SN (2005)	1